WikiJournal of Medicine/Diagram of the pathways of human steroidogenesis
Figure 1 | (March 2007) Previous image by Stannered
Figure 3 | (November 2007) Organization and addition of enzymes by Häggström
Figure 4 | (August 2008) Vector (.svg) version by Richfield
Following is a list of the major classes of steroid hormones and some prominent members, with examples of major related functions:
An overview of the pathways wherein these steroids are produced can be achieved by a diagram.
The creation of a steroidogenesis diagram was essentially a work of multiple authors that was made available by the licensing of the images, that is, by GNU Free Documentation License and Creative Commons licenses. With these licenses, previous versions could be edited and improved without seeking written permission each time such an edit was made.
At right is a selection of images that can be regarded as milestones in the development of the steroidogenesis diagram. They are given chronological numbers, with the final version given as number "5" in the results section. Image "4" availed for even easier creation of subsequent works by being a vector image, that is, an image based on a few adjustable points in space rather than millions of pixels. Therefore, subsequent derivatives can easily be edited by free vector graphics editors, in this case Inkscape. Compared to "4", the final version "5" had the following additions:
- Grouping into the major classes of steroids. This step used the textbook Medical Physiology by Boron & Boulpaep as reference, as well as for confirmation of existing molecular structures, enzymes, and products. In addition, for the absence of conversion of corticosterone to cortisol, it used a statement from the Kyoto University Bioinformatics Center that "there is no appreciable conversion of corticosterone to cortisol in the adrenal cortex as 21-OH steroids are poor substrates for 17-alpha hydroxylase." Also, group borders were made transparent between progestagens, mineralocorticoids and glucocorticoids, since many of the included molecules have activities associated with more than one group. For example, cortisol is a typical glucocorticoid, but also has affinity for the mineralocorticoid receptor, although this effect is minor in normal cases because of the enzyme 11β-hydroxysteroid dehydrogenase that breaks down cortisol in the locations where mineralocorticoids play the greatest role. Therefore, the mineralocorticoid field in the diagram also spans over cortisol, but shown in very transparent color because of the small effect. Likewise, corticosterone has strong affinity towards the mineralocorticoid receptor, and it also has an affinity towards the glucocorticoid receptor but this affinity is very weak, and therefore the glucocorticoid field only covers this molecule transparently.
- Addition of enzyme localizations, that is, either in mitochondria or in the smooth endoplasmic reticulum. This information was also taken from Medical Physiology.
- Numbering of the cholesterol carbons, as by convention that is seen for example in the textbook Principles and Practice of Endocrinology and Metabolism.
- Addition of white circles to indicate changes in molecular structure compared with precursors.
- Addition of stereochemistry specifications, that is, standard designations that specify how the atoms are arranged in three dimensions where there are several possible arrangements.
Figure 5 | (March 2009) Expansion, grouping, numbering of cholesterol and coloring by Häggström
The abbreviation HSD stands for "hydroxysteroid dehydrogenase".
This diagram is an example in demonstrating the power of free licensing where anybody can contribute to making things better.
Limitations of the diagram include the fact that there are many additional members of each class. Rather, only the most important pathways are included, in order to provide a model for the creation of the most important steroids, and the main mechanisms by which diseases arise from disturbances in these pathways.
- Hanukoglu I (Dec 1992). "Steroidogenic enzymes: structure, function, and role in regulation of steroid hormone biosynthesis.". J Steroid Biochem Mol Biol 43 (8): 779–804. doi:10.1016/0960-0760(92)90307-5. PMID 22217824.
- Walter F. Boron, Emile L. Boulpaep (2003). Medical Physiology: A Cellular And Molecular Approach. Elsevier/Saunders. pp. page 1300. ISBN 1-4160-2328-3.CS1 maint: extra text (link)
- "Steroid hormone biosynthesis - Reference pathway (KO)". Kyoto University Bioinformatics Center. 2013-01-11.
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- Page 705 in:Becker, Kenneth L. (2001). Principles and Practice of Endocrinology and Metabolism. Lippincott Williams & Wilkins. ISBN 978-0-7817-1750-2.